Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
Use This Page
scanfilteropen recordscompare
Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.
Most Common Traits in This Slice
A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.
21 results filtered by organelle: mitochondria filtered by family: X-ray
In this slice of the corpus, 21 dataset records match. SXT is the most common imaging family and mitochondria is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is mitochondria:nucleus.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| M. musculus, alpha cell whole-cell dataset (SXT) Deshmukh et al., 2024, Cells · PMID 38786091 | M. musculus, alpha cell M. musculus | SXT | 38.25 x 38.25 nm voxel (XY/Z) isotropic | 8 | Not Indexed | |
| M. musculus, beta cell whole-cell dataset (SXT) Deshmukh et al., 2024, Cells · PMID 38786091 | M. musculus, beta cell M. musculus | SXT | 38.25 x 38.25 nm voxel (XY/Z) isotropic | 7 | Not Indexed | |
| Candida utilis whole-cell dataset (SXT) Dang et al., 2023, ACS Nano · PMID 37156644 | Candida utilis Candida utilis | SXT | 30 x 30 nm voxel (XY/Z) isotropic | 40 | Not Indexed | |
| B lymphocyte whole-cell dataset (SXT) Chen et al., 2022, Viruses · PMID 36560654 | B lymphocyte B lymphocyte | SXT | 60 x 60 nm voxel (XY/Z) isotropic | 1 | Not Indexed | |
| INS-1E (R. norvegicus) whole-cell dataset (SXT) Li et al., 2022, PLoS One. · PMID 35324950 | INS-1E (R. norvegicus) Rodent | SXT | 60 x 60 nm voxel (XY/Z) isotropic | 132 | Not Indexed | |
| INS-1E (R. norvegicus) whole-cell dataset (SXT) Loconte et al., 2022, Structure · PMID 35148829 | INS-1E (R. norvegicus) Rodent | SXT | 60 x 60 nm voxel (XY/Z) isotropic | 56 | Not Indexed | |
| GM12878 (B lymphocyte) whole-cell dataset (SXT) Loconte et al., 2021, Cell Reports Methods · PMID 34729550 | GM12878 (B lymphocyte) Human (differentiated) | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 17 | Not Indexed | |
| HEK293T whole-cell dataset (SXT) Loconte et al., 2021, Cell Reports Methods · PMID 34729550 | HEK293T Human (cancerous) | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 3 | Not Indexed | |
| Babesia divergens whole-cell dataset (SXT) Conesa et al., 2020, mSphere · PMID 33055261 | Babesia divergens Babesia divergens | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 40 | Not Indexed | |
| INS-1E (R. norvegicus) whole-cell dataset (SXT) White et al., 2020, Science Advances · PMID 33298443 | INS-1E (R. norvegicus) Rodent | SXT | 60 x 60 nm voxel (XY/Z) isotropic | 40 | Not Indexed | |
| Candida utilis whole-cell dataset (SXT) Liu et al., 2018, Journal of Microscopy · PMID 28960304 | Candida utilis Candida utilis | SXT | 30 x 30 nm voxel (XY/Z) isotropic | 2 | Not Indexed | |
| hESC (embryonic) whole-cell dataset (SXT) Niclis et al., 2015, J Royal Society Interface · PMID 26063819 | hESC (embryonic) Human (undifferentiated) | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 12 | Not Indexed | |
| hASC (adipose-derived) whole-cell dataset (SXT) Niclis et al., 2015, J Royal Society Interface · PMID 26063819 | hASC (adipose-derived) Human (undifferentiated) | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 12 | Not Indexed | |
| Neospora caninum whole-cell dataset (X-ray diffraction) Rodriguez et al., 2015, IUCrJ · PMID 26306199 | Neospora caninum Neospora caninum | X-ray diffraction | 86.5 x 86.5 nm voxel (XY/Z) isotropic | 1 | Not Indexed | |
| Saccharomyces cerevisiae whole-cell dataset (SXT) Carlson et al., 2013, Microscopy and Microanalysis · PMID 23332214 | Saccharomyces cerevisiae Saccharomyces cerevisiae | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 1 | Not Indexed | |
| Chlamydomonas reinhartdii whole-cell dataset (SXT) Hummel et al., 2012, PLoS One · PMID 23300909 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | SXT | 40 x 40 nm voxel (XY/Z) isotropic | 14 | Not Indexed | |
| Schizosaccharomyces pombe whole-cell dataset (HXT) Zheng et al., 2012, Microscopy research and technique · PMID 22505187 | Schizosaccharomyces pombe Schizosaccharomyces pombe | HXT | 50 x 50 nm voxel (XY/Z) isotropic | 3 | Not Indexed | |
| Saccharomyces cerevisiae whole-cell dataset (SXT) Uchida et al., 2011, Yeast · PMID 21360734 | Saccharomyces cerevisiae Saccharomyces cerevisiae | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 200 | Not Indexed | |
| Schizosaccharomyces pombe whole-cell dataset (X-ray diffraction) Jiang et al., 2010, PNAS · PMID 20534442 | Schizosaccharomyces pombe Schizosaccharomyces pombe | X-ray diffraction | 55 x 55 nm voxel (XY/Z) isotropic | 1 | Not Indexed | |
| Candida albicans whole-cell dataset (SXT) Uchida et al., 2009, Proc Natl Acad Sci USA · PMID 19880740 | Candida albicans Candida albicans | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 42 | Not Indexed | |
| Schizosaccharomyces pombe whole-cell dataset (SXT) Parkinson et al., 2008, Journal of Structural Biology · PMID 18387313 | Schizosaccharomyces pombe Schizosaccharomyces pombe | SXT | 20 x 20 nm voxel (XY/Z) isotropic | 4 | Not Indexed |
Compare Mode Preview
Example Compare Summary
Moderate comparability; useful for targeted comparison with technical caveats.
Shared Fields
cell_types: nonespecies: M. musculusorganelles: mitochondria, nucleus, vesiclesorganelle_pairs: mitochondria:nucleus, mitochondria:vesicles, nucleus:vesiclesmetric_families: count, density, dimensions, surface_area, volume, volume_fractioncomparator_classes: cell typemodality_families: X-ray
Key Differences
modalities: SXTsample_size_buckets: 2-10public_data_statuses: noneboundary_confirmation: yes
Comparability Score:70 / 100
How It's Derived