Corpus
Search the Whole-Cell Imaging Corpus.
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Most Common Traits in This Slice
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3 results filtered by metric: contacts filtered by pair: er:golgi
In this slice of the corpus, 3 dataset records match. ssTEM is the most common imaging family and er is the organelle that appears most often with contacts as the most common metric family. The most common captured organelle pair is er:golgi.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Salpingoeca rosetta whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Salpingoeca rosetta Salpingoeca rosetta | ssTEM | Unknown | 6 | Partial | |
| Oscarella carmela, choanocytes whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Oscarella carmela, choanocytes Oscarella carmela | ssTEM | Unknown | 5 | Partial | |
| COS-7 (Cercopithecus aethiops) whole-cell dataset (Fluorescence (LLS)) Valm et al., 2017, Nature · PMID 28538724 | COS-7 (Cercopithecus aethiops) NHP | Fluorescence (LLS) | 334.5 x 798 nm voxel (XY/Z) | 10 | Not Indexed |
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Moderate comparability; useful for targeted comparison with technical caveats.
Shared Fields
cell_types: nonespecies: noneorganelles: centrosome/basal body, er, flagella/cilia, golgi, mitochondria, nucleus, vacuole/lysosomeorganelle_pairs: centrosome/basal body:er, centrosome/basal body:flagella/cilia, centrosome/basal body:golgi, centrosome/basal body:mitochondria, centrosome/basal body:nucleus, centrosome/basal body:vacuole/lysosome, er:flagella/cilia, er:golgi, er:mitochondria, er:nucleus, er:vacuole/lysosome, flagella/cilia:golgi, flagella/cilia:mitochondria, flagella/cilia:nucleus, flagella/cilia:vacuole/lysosome, golgi:mitochondria, golgi:nucleus, golgi:vacuole/lysosome, mitochondria:nucleus, mitochondria:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: contacts, count, dimensions, distance, shape, volume, volume_fractioncomparator_classes: developmental stagemodality_families: EM
Key Differences
modalities: ssTEMsample_size_buckets: 2-10public_data_statuses: partialboundary_confirmation: yes
Comparability Score:65 / 100
How It's Derived