Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
Use This Page
scanfilteropen recordscompare
Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.
Most Common Traits in This Slice
A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.
6 results filtered by organelle: lipid droplets filtered by metric: density
In this slice of the corpus, 6 dataset records match. SXT is the most common imaging family and lipid droplets is the organelle that appears most often with density as the most common metric family. The most common captured organelle pair is lipid droplets:nucleus.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Leishmania mexicana whole-cell dataset (SBF-SEM) Hair et al., 2024, PLOS Pathogens · PMID 38416776 | Leishmania mexicana Leishmania mexicana | SBF-SEM | 5 x 87.5 nm voxel (XY/Z) | 51 | Partial | |
| Candida utilis whole-cell dataset (SXT) Dang et al., 2023, ACS Nano · PMID 37156644 | Candida utilis Candida utilis | SXT | 30 x 30 nm voxel (XY/Z) isotropic | 40 | Not Indexed | |
| INS-1E (R. norvegicus) whole-cell dataset (SXT) White et al., 2020, Science Advances · PMID 33298443 | INS-1E (R. norvegicus) Rodent | SXT | 60 x 60 nm voxel (XY/Z) isotropic | 40 | Not Indexed | |
| Chlamydomonas reinhartdii whole-cell dataset (HXT (ptychography)) Diaz et al., 2015, Journal of Structural Biology · PMID 26470812 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | HXT (ptychography) | 180 x 180 nm voxel (XY/Z) isotropic | 3 | Not Indexed | |
| Saccharomyces cerevisiae whole-cell dataset (SXT) Uchida et al., 2011, Yeast · PMID 21360734 | Saccharomyces cerevisiae Saccharomyces cerevisiae | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 200 | Not Indexed | |
| Candida albicans whole-cell dataset (SXT) Uchida et al., 2009, Proc Natl Acad Sci USA · PMID 19880740 | Candida albicans Candida albicans | SXT | 50 x 50 nm voxel (XY/Z) isotropic | 42 | Not Indexed |
Compare Mode Preview
Example Compare Summary
Low direct comparability; treat these datasets as analogs rather than close matches.
Shared Fields
cell_types: nonespecies: noneorganelles: lipid droplets, mitochondria, nucleus, vacuole/lysosomeorganelle_pairs: lipid droplets:mitochondria, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, mitochondria:nucleus, mitochondria:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: count, density, volume, volume_fractioncomparator_classes: nonemodality_families: none
Key Differences
modalities: SBF-SEM, SXTsample_size_buckets: 11-50, 51+public_data_statuses: none, partialboundary_confirmation: yes
Comparability Score:42 / 100
How It's Derived