Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
Use This Page
Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.
Commonality Snapshot
A quick reading of the active result set. Click a trait to narrow the corpus to that subset; this is a frequency snapshot, not a quality ranking.
11 results filtered by organelle: vacuole/lysosome filtered by metric: density
In this slice of the corpus, 11 dataset records match. SXT is the most common imaging family and vacuole/lysosome is the organelle that appears most often with density as the most common metric family. The most common captured organelle pair is nucleus:vacuole/lysosome.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Leishmania mexicana whole-cell dataset (SBF-SEM) Hair et al., 2024, PLOS Pathogens · PMID 38416776 | Leishmania mexicana Leishmania mexicana | SBF-SEM | 5 x 87.5 nm voxel size (XY/Z, 3D) | 51 | Partial | |
| Saccharomyces cerevisiae whole-cell dataset (Optical tomography (phase contrast)) Bianco et al., 2023, Small Methods · PMID 37670547 | Saccharomyces cerevisiae Saccharomyces cerevisiae | Optical tomography (phase contrast) | 0.5 nm voxel size (XY) | 4 | None indexed | |
| Candida utilis whole-cell dataset (SXT) Dang et al., 2023, ACS Nano · PMID 37156644 | Candida utilis Candida utilis | SXT | 30 x 30 nm voxel size (XY/Z, 3D) isotropic | 40 | None indexed | |
| Cylindrotheca sp. whole-cell dataset (Optical tomography (diffraction)) Umemura et al., 2020, MethodsX · PMID 32382522 | Cylindrotheca sp. Cylindrotheca sp. | Optical tomography (diffraction) | 100 x 360 nm voxel size (XY/Z, 3D) | 1 | None indexed | |
| M. musculus, macrophage whole-cell dataset (STXM) Yao et al., 2018, IUCrJ · PMID 29765603 | M. musculus, macrophage M. musculus | STXM | 77.5 x 50 nm voxel size (XY/Z, 3D) | 1 | None indexed | |
| Chlamydomonas reinhartdii whole-cell dataset (HXT (ptychography)) Diaz et al., 2015, Journal of Structural Biology · PMID 26470812 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | HXT (ptychography) | 180 x 180 nm voxel size (XY/Z, 3D) isotropic | 3 | None indexed | |
| hESC (embryonic) whole-cell dataset (SXT) Niclis et al., 2015, J Royal Society Interface · PMID 26063819 | hESC (embryonic) Human (undifferentiated) | SXT | 50 x 50 nm voxel size (XY/Z, 3D) isotropic | 12 | None indexed | |
| hASC (adipose-derived) whole-cell dataset (SXT) Niclis et al., 2015, J Royal Society Interface · PMID 26063819 | hASC (adipose-derived) Human (undifferentiated) | SXT | 50 x 50 nm voxel size (XY/Z, 3D) isotropic | 12 | None indexed | |
| Saccharomyces cerevisiae whole-cell dataset (SXT) Uchida et al., 2011, Yeast · PMID 21360734 | Saccharomyces cerevisiae Saccharomyces cerevisiae | SXT | 50 x 50 nm voxel size (XY/Z, 3D) isotropic | 200 | None indexed | |
| Schizosaccharomyces pombe whole-cell dataset (X-ray diffraction) Jiang et al., 2010, PNAS · PMID 20534442 | Schizosaccharomyces pombe Schizosaccharomyces pombe | X-ray diffraction | 55 x 55 nm voxel size (XY/Z, 3D) isotropic | 1 | None indexed | |
| Candida albicans whole-cell dataset (SXT) Uchida et al., 2009, Proc Natl Acad Sci USA · PMID 19880740 | Candida albicans Candida albicans | SXT | 50 x 50 nm voxel size (XY/Z, 3D) isotropic | 42 | None indexed |
Comparison Summary
Moderate comparability; useful for targeted comparison with technical caveats.