Nicotiana tabacum
Nicotiana tabacum whole-cell dataset (FIB-SEM)
Zechmann et al., 2022, Planta · FIB-SEM
SSBoundary
Key Organelles
nucleusmitochondriavacuole/lysosome
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5 results filtered by organelle: peroxisome filtered by metric: dimensions
In this slice of the corpus, 5 dataset records match. FIB-SEM is the most common imaging family and chloroplast/plastid is the organelle that appears most often with dimensions as the most common metric family. The most common captured organelle pair is chloroplast/plastid:mitochondria.
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ResResolution values are reported.
SSSample size is reported.
BoundaryWhole-cell boundary is confirmed.
Public DataReusable public data is known to exist.
BorderlineRecord has a caveat relative to the main corpus criteria.
Nicotiana tabacum
Nicotiana tabacum whole-cell dataset (ssTEM)
Zechmann et al., 2022, Planta · ssTEM
SSBoundary
Key Organelles
nucleusmitochondriavacuole/lysosome
Cucurbita pepo
Cucurbita pepo whole-cell dataset (FIB-SEM)
Zechmann et al., 2022, Planta · FIB-SEM
SSBoundary
Key Organelles
nucleusmitochondriavacuole/lysosome
Cucurbita pepo
Cucurbita pepo whole-cell dataset (ssTEM)
Zechmann et al., 2022, Planta · ssTEM
SSBoundary
Key Organelles
nucleusmitochondriavacuole/lysosome
Ostreococcus tauri
Ostreococcus tauri whole-cell dataset (ET (cryo))
Henderson et al., 2007, PLoS One · ET (cryo)
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 10 (6 best cells used for quantitation) (52 imaged total); 23 dark-to-light transition; 29 light-to-dark transition;
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High biological overlap with enough shared structure to justify direct comparison.
Shared Fields
cell_types: Nicotiana tabacumspecies: Nicotiana tabacumorganelles: chloroplast/plastid, mitochondria, nucleus, peroxisome, vacuole/lysosomeorganelle_pairs: chloroplast/plastid:mitochondria, chloroplast/plastid:nucleus, chloroplast/plastid:peroxisome, chloroplast/plastid:vacuole/lysosome, mitochondria:nucleus, mitochondria:peroxisome, mitochondria:vacuole/lysosome, nucleus:peroxisome, nucleus:vacuole/lysosome, peroxisome:vacuole/lysosomemetric_families: count, dimensions, surface_area, volume, volume_fractioncomparator_classes: cell typemodality_families: EM
Key Differences
modalities: FIB-SEM, ssTEMsample_size_buckets: 1public_data_statuses: noneboundary_confirmation: yes
Comparability Score:100 / 100
How It's Derived