GM12878 (B lymphocyte)
GM12878 (B lymphocyte) whole-cell dataset (SXT)
Loconte et al., 2021, Cell Reports Methods · PMID 34729550 · SXT
ResSSBoundary
Key Organelles
ermitochondrialipid droplets
Corpus
Search the Whole-Cell Imaging Corpus.
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Commonality Snapshot
A quick reading of the active result set. Click a trait to narrow the corpus to that subset; this is a frequency snapshot, not a quality ranking.
7 results filtered by organelle: er filtered by pair: er:vesicles
In this slice of the corpus, 7 dataset records match. FIB-SEM is the most common imaging family and er is the organelle that appears most often with dimensions as the most common metric family. The most common captured organelle pair is er:mitochondria.
Card Tag Legend
ResThree-dimensional voxel size is reported.
SSSample size is reported.
BoundaryWhole-cell boundary confirmation is present.
Public DataA reusable public-data locator is known to exist.
BorderlineRecord has a caveat relative to the main corpus criteria.
HEK293T
HEK293T whole-cell dataset (SXT)
Loconte et al., 2021, Cell Reports Methods · PMID 34729550 · SXT
ResSSBoundary
Key Organelles
ermitochondrialipid droplets
Salpingoeca rosetta
Salpingoeca rosetta whole-cell dataset (ssTEM)
Laundon et al., 2019, PLOS Biology · PMID 30978201 · ssTEM
SSBoundaryPublic Data: Partial
Key Organelles
nucleusermitochondria
Curation note: Some public data available. 3 colonial, 3 single
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (ssTEM)
Yamaguchi et al., 2011, J Electron Microsc (Tokyo) · PMID 21908548 · ssTEM
ResSSBoundary
Key Organelles
ermitochondriavacuole/lysosome
Curation note: (3 G1, 3 early G1)
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Comparison Summary
High biological overlap with enough shared structure to justify direct comparison.
This selection includes multiple dataset records from the same paper: Wei 2012. Treat the result as an within-study alignment check, not independent cross-study validation.
Shared Fields
Cell Type: Saccharomyces cerevisiaeSpecies: Saccharomyces cerevisiaeOrganelles: er, golgi, lipid droplets, mitochondria, nucleus, vacuole/lysosome, vesiclesDerived Organelle Pairs: er:golgi, er:lipid droplets, er:mitochondria, er:nucleus, er:vacuole/lysosome, er:vesicles, golgi:lipid droplets, golgi:mitochondria, golgi:nucleus, golgi:vacuole/lysosome, golgi:vesicles, lipid droplets:mitochondria, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, lipid droplets:vesicles, mitochondria:nucleus, mitochondria:vacuole/lysosome, mitochondria:vesicles, nucleus:vacuole/lysosome, nucleus:vesicles, vacuole/lysosome:vesiclesMetric Families: dimensions, volume, volume_fractionComparator / Condition: noneModality Family: EM
Key Differences
Modality: FIB-SEMSample Size Band: 1Public Data Status: noneBoundary Confirmation: yes
Comparability Score:84 / 100
How It's Derived