Corpus
Search the Whole-Cell Imaging Corpus.
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Most Common Traits in This Slice
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5 results filtered by organelle: er filtered by public data status: partial
In this slice of the corpus, 5 dataset records match. SBF-SEM is the most common imaging family and er is the organelle that appears most often with dimensions as the most common metric family. The most common captured organelle pair is er:nucleus.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Leishmania mexicana whole-cell dataset (SBF-SEM) Hair et al., 2024, PLOS Pathogens · PMID 38416776 | Leishmania mexicana Leishmania mexicana | SBF-SEM | 5 x 87.5 nm voxel (XY/Z) | 51 | Partial | |
| Encephalitozoon intestinalis whole-cell dataset (SBF-SEM) Antao et al., 2023, Nature Communications · PMID 37996434 | Encephalitozoon intestinalis Encephalitozoon intestinalis | SBF-SEM | 2 x 45 nm voxel (XY/Z) | 21 | Partial | |
| Vero (Cercopithecus aethiops) whole-cell dataset (SBF-SEM) Antao et al., 2023, Nature Communications · PMID 37996434 | Vero (Cercopithecus aethiops) NHP | SBF-SEM | 2 x 45 nm voxel (XY/Z) | 4 | Partial | |
| Salpingoeca rosetta whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Salpingoeca rosetta Salpingoeca rosetta | ssTEM | Unknown | 6 | Partial | |
| Oscarella carmela, choanocytes whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Oscarella carmela, choanocytes Oscarella carmela | ssTEM | Unknown | 5 | Partial |
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Example Compare Summary
Low direct comparability; treat these datasets as analogs rather than close matches.
Shared Fields
cell_types: nonespecies: noneorganelles: er, mitochondria, nucleus, vacuole/lysosomeorganelle_pairs: er:mitochondria, er:nucleus, er:vacuole/lysosome, mitochondria:nucleus, mitochondria:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: dimensions, volume, volume_fractioncomparator_classes: nonemodality_families: EM
Key Differences
modalities: SBF-SEMsample_size_buckets: 11-50, 51+public_data_statuses: partialboundary_confirmation: yes
Comparability Score:49 / 100
How It's Derived