Chlamydomonas reinhartdii
Chlamydomonas reinhartdii whole-cell dataset (SXT)
Xu et al., 2024, ACS Nano · SXT
ResSSBoundary
Key Organelles
nucleuservacuole/lysosome
Curation note: 6 ctrl + 6 AgNP-treated
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10 results filtered by organelle: flagella/cilia filtered by pair: flagella/cilia:nucleus filtered by public data status: none
In this slice of the corpus, 10 dataset records match. SBF-SEM is the most common imaging family and flagella/cilia is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is flagella/cilia:nucleus.
Card Tag Legend
ResResolution values are reported.
SSSample size is reported.
BoundaryWhole-cell boundary is confirmed.
Public DataReusable public data is known to exist.
BorderlineRecord has a caveat relative to the main corpus criteria.
Lacrimia vacuolata
Lacrimia vacuolata whole-cell dataset (SBF-SEM)
Tashyreva et al., 2023, mBio · SBF-SEM
ResSSBoundary
Key Organelles
nucleusmitochondrialipid droplets
Trypanosoma sp. 858
Trypanosoma sp. 858 whole-cell dataset (FIB-SEM)
Attias et al., 2022, Micron · FIB-SEM
SSBoundary
Key Organelles
nucleuslipid dropletsflagella/cilia
Curation note: Unclear
Trypanosoma brucei
Trypanosoma brucei whole-cell dataset (SBF-SEM)
Hughes et al., 2017, Journal of Cell Science · SBF-SEM
ResSSBoundary
Key Organelles
nucleusmitochondriagolgi
Curation note: (different n's for each quant)
Trypanosoma brucei
Trypanosoma brucei whole-cell dataset (SBF-SEM)
Gluenz et al., 2015, Methods in Cell Biology · SBF-SEM
ResSSBoundary
Key Organelles
nucleusmitochondriavesicles
Curation note: Fig 9. original data
Trypanosoma cruzi
Trypanosoma cruzi whole-cell dataset (ET (cryo))
Girard-Dias et al., 2012, Histochemistry and Cell Biology · ET (cryo)
SSBoundary
Key Organelles
nucleusvacuole/lysosomeflagella/cilia
Curation note: (M&M mentions "35 tomograms (appox. 25 from epimastigotes and 10 from amastigotes and epimastigotes)"
Chlamydomonas reinhartdii
Chlamydomonas reinhartdii whole-cell dataset (SXT)
Hummel et al., 2012, PLoS One · SXT
ResSSBoundary
Key Organelles
nucleusmitochondriavacuole/lysosome
Curation note: (6 wt; 8 mutant)
Trypanosoma cruzi
Trypanosoma cruzi whole-cell dataset (ssTEM)
Ramos et al., 2011, Cytometry A · ssTEM
ResSSBoundary
Key Organelles
nucleusmitochondriavesicles
Crithidia deanei
Crithidia deanei whole-cell dataset (FIB-SEM)
Motta et al., 2010, PLoS ONE · FIB-SEM
SSBoundary
Key Organelles
nucleusflagella/cilia
Curation note: "The description of events and timings in the C. deanei cell cycle were based on counts of 1000 cells."
Trypanosoma cruzi
Trypanosoma cruzi whole-cell dataset (ssTEM)
Ferreira et al., 2008, Annals of the Brazilian Academy of Sciences · ssTEM
SSBoundary
Key Organelles
nucleusflagella/cilia
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Example Compare Summary
High biological overlap with enough shared structure to justify direct comparison.
Shared Fields
cell_types: Chlamydomonas reinhartdiispecies: Chlamydomonas reinhartdiiorganelles: flagella/cilia, lipid droplets, nucleus, vacuole/lysosomeorganelle_pairs: flagella/cilia:lipid droplets, flagella/cilia:nucleus, flagella/cilia:vacuole/lysosome, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: volume, volume_fractioncomparator_classes: nonemodality_families: X-ray
Key Differences
modalities: SXTsample_size_buckets: 11-50public_data_statuses: noneboundary_confirmation: yes
Comparability Score:81 / 100
How It's Derived