Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
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Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.
Commonality Snapshot
A quick reading of the active result set. Click a trait to narrow the corpus to that subset; this is a frequency snapshot, not a quality ranking.
14 results filtered by organelle: flagella/cilia filtered by pair: flagella/cilia:nucleus
In this slice of the corpus, 14 dataset records match. SBF-SEM is the most common imaging family and flagella/cilia is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is flagella/cilia:nucleus.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Leishmania mexicana whole-cell dataset (SBF-SEM) Hair et al., 2024, PLOS Pathogens · PMID 38416776 | Leishmania mexicana Leishmania mexicana | SBF-SEM | 5 x 87.5 nm voxel size (XY/Z, 3D) | 51 | Partial | |
| Chlamydomonas reinhartdii whole-cell dataset (SXT) Xu et al., 2024, ACS Nano · PMID 38198284 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | SXT | 30 x 30 nm voxel size (XY/Z, 3D) isotropic | 12 | None indexed | |
| Ensiculifera tyrrhenica whole-cell dataset (FIB-SEM) Mocaer et al., 2023, Journal of Cell Science · PMID 37455654 | Ensiculifera tyrrhenica Ensiculifera tyrrhenica | FIB-SEM | 8 x 8 nm voxel size (XY/Z, 3D) isotropic | 1 | Partial | |
| Lacrimia vacuolata whole-cell dataset (SBF-SEM) Tashyreva et al., 2023, mBio · PMID 37737610 | Lacrimia vacuolata Lacrimia vacuolata | SBF-SEM | 6 x 100 nm voxel size (XY/Z, 3D) | 24 | None indexed | |
| Trypanosoma sp. 858 whole-cell dataset (FIB-SEM) Attias et al., 2022, Micron · PMID 34798356 | Trypanosoma sp. 858 Protist (parasitic protozoan) | FIB-SEM | Unknown | 1 | None indexed | |
| Salpingoeca rosetta whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Salpingoeca rosetta Salpingoeca rosetta | ssTEM | Unknown | 6 | Partial | |
| Oscarella carmela, choanocytes whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Oscarella carmela, choanocytes Oscarella carmela | ssTEM | Unknown | 5 | Partial | |
| Trypanosoma brucei whole-cell dataset (SBF-SEM) Hughes et al., 2017, Journal of Cell Science · PMID 28049718 | Trypanosoma brucei Trypanosoma brucei | SBF-SEM | 6.1 x 100 nm voxel size (XY/Z, 3D) | 79 | None indexed | |
| Trypanosoma brucei whole-cell dataset (SBF-SEM) Gluenz et al., 2015, Methods in Cell Biology · PMID 25837406 | Trypanosoma brucei Trypanosoma brucei | SBF-SEM | 6.1 x 100 nm voxel size (XY/Z, 3D) | 1 | None indexed | |
| Trypanosoma cruzi whole-cell dataset (ET (cryo)) Girard-Dias et al., 2012, Histochemistry and Cell Biology · PMID 22872316 | Trypanosoma cruzi Trypanosoma cruzi | ET (cryo) | Unknown | 1 | None indexed | |
| Chlamydomonas reinhartdii whole-cell dataset (SXT) Hummel et al., 2012, PLoS One · PMID 23300909 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | SXT | 40 x 40 nm voxel size (XY/Z, 3D) isotropic | 14 | None indexed | |
| Trypanosoma cruzi whole-cell dataset (ssTEM) Ramos et al., 2011, Cytometry A · PMID 21567937 | Trypanosoma cruzi Trypanosoma cruzi | ssTEM | 200 x 200 nm voxel size (XY/Z, 3D) isotropic | 1 | None indexed | |
| Crithidia deanei whole-cell dataset (FIB-SEM) Motta et al., 2010, PLoS ONE · PMID 20865129 | Crithidia deanei Crithidia deanei | FIB-SEM | Unknown | 1 | None indexed | |
| Trypanosoma cruzi whole-cell dataset (ssTEM) | Trypanosoma cruzi Trypanosoma cruzi | ssTEM | Unknown | 1 | None indexed |
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Comparison Summary
High biological overlap with enough shared structure to justify direct comparison.
Shared Fields
Cell Type: Chlamydomonas reinhartdiiSpecies: Chlamydomonas reinhartdiiOrganelles: flagella/cilia, lipid droplets, nucleus, vacuole/lysosomeDerived Organelle Pairs: flagella/cilia:lipid droplets, flagella/cilia:nucleus, flagella/cilia:vacuole/lysosome, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, nucleus:vacuole/lysosomeMetric Families: volume, volume_fractionComparator / Condition: noneModality Family: X-ray
Key Differences
Modality: SXTSample Size Band: 11-50Public Data Status: noneBoundary Confirmation: yes
Comparability Score:81 / 100
How It's Derived