Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
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Most Common Traits in This Slice
A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.
6 results filtered by organelle: nucleus filtered by pair: flagella/cilia:vacuole/lysosome
In this slice of the corpus, 6 dataset records match. SXT is the most common imaging family and flagella/cilia is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is flagella/cilia:nucleus.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Leishmania mexicana whole-cell dataset (SBF-SEM) Hair et al., 2024, PLOS Pathogens · PMID 38416776 | Leishmania mexicana Leishmania mexicana | SBF-SEM | 5 x 87.5 nm voxel (XY/Z) | 51 | Partial | |
| Chlamydomonas reinhartdii whole-cell dataset (SXT) Xu et al., 2024, ACS Nano · PMID 38198284 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | SXT | 30 x 30 nm voxel (XY/Z) isotropic | 12 | Not Indexed | |
| Salpingoeca rosetta whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Salpingoeca rosetta Salpingoeca rosetta | ssTEM | Unknown | 6 | Partial | |
| Oscarella carmela, choanocytes whole-cell dataset (ssTEM) Laundon et al., 2019, PLOS Biology · PMID 30978201 | Oscarella carmela, choanocytes Oscarella carmela | ssTEM | Unknown | 5 | Partial | |
| Trypanosoma cruzi whole-cell dataset (ET (cryo)) Girard-Dias et al., 2012, Histochemistry and Cell Biology · PMID 22872316 | Trypanosoma cruzi Trypanosoma cruzi | ET (cryo) | Unknown | 1 | Not Indexed | |
| Chlamydomonas reinhartdii whole-cell dataset (SXT) Hummel et al., 2012, PLoS One · PMID 23300909 | Chlamydomonas reinhartdii Chlamydomonas reinhartdii | SXT | 40 x 40 nm voxel (XY/Z) isotropic | 14 | Not Indexed |
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Example Compare Summary
High biological overlap with enough shared structure to justify direct comparison.
Shared Fields
cell_types: Chlamydomonas reinhartdiispecies: Chlamydomonas reinhartdiiorganelles: flagella/cilia, lipid droplets, nucleus, vacuole/lysosomeorganelle_pairs: flagella/cilia:lipid droplets, flagella/cilia:nucleus, flagella/cilia:vacuole/lysosome, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: volume, volume_fractioncomparator_classes: nonemodality_families: X-ray
Key Differences
modalities: SXTsample_size_buckets: 11-50public_data_statuses: noneboundary_confirmation: yes
Comparability Score:81 / 100
How It's Derived