Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
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Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.
Most Common Traits in This Slice
A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.
In this slice of the corpus, 3 dataset records match. ET (cryo) is the most common imaging family and chloroplast/plastid is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is chloroplast/plastid:er.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Chlorella pyrenoidosa whole-cell dataset (FIB-SEM) Feng et al., 2023, Protoplasma · PMID 36416933 | Chlorella pyrenoidosa Chlorella pyrenoidosa | FIB-SEM | 2.44 x 8 nm voxel (XY/Z) | 9 | Not Indexed | |
| Arabidopsis thaliana, cortical root whole-cell dataset (ET (cryo)) Cui et al., 2019, Nature Plants · PMID 30559414 | Arabidopsis thaliana, cortical root Arabidopsis thaliana | ET (cryo) | 4.3 x 300 nm voxel (XY/Z) | 1 | Not Indexed | |
| Ostreococcus tauri whole-cell dataset (ET (cryo)) Henderson et al., 2007, PLoS One · PMID 17710148 | Ostreococcus tauri Ostreococcus tauri | ET (cryo) | 1.2 x 1.2 nm voxel (XY/Z) isotropic | 10 | Not Indexed |
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Example Compare Summary
Moderate comparability; useful for targeted comparison with technical caveats.
Shared Fields
cell_types: nonespecies: noneorganelles: chloroplast/plastid, er, mitochondria, nucleus, vacuole/lysosomeorganelle_pairs: chloroplast/plastid:er, chloroplast/plastid:mitochondria, chloroplast/plastid:nucleus, chloroplast/plastid:vacuole/lysosome, er:mitochondria, er:nucleus, er:vacuole/lysosome, mitochondria:nucleus, mitochondria:vacuole/lysosome, nucleus:vacuole/lysosomemetric_families: volume, volume_fractioncomparator_classes: metabolic conditionmodality_families: EM
Key Differences
modalities: ET (cryo), FIB-SEMsample_size_buckets: 1, 2-10public_data_statuses: noneboundary_confirmation: yes
Comparability Score:56 / 100
How It's Derived