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Pelagomonas

Protist (plankton)

Pelagomonas whole-cell dataset (FIB-SEM)

Uwizeye et al., 2021, Nature Communications

Find datasets with same cell type

Curation Notes

Some public data available.

Technical Specs

Modality

FIB-SEM

Voxel Size

6 x 6 nm voxel (XY/Z) isotropic

Sample Size

3

Whole-Cell Boundary

yes

Comparators / Conditions

Comparator Class

cell type

Comparator Detail

Light/Dark; Cell Type/Species; Other: Trophic conditions

Provenance

This record was ingested from the Cell Anatomy Scoping Review corpus.

PMID 33594064 View Publication Data Publicly Available: Partial

Public Data Links

https://www.ebi.ac.uk/biostudies/bioimages/studies/S-BSST575 https://www.ebi.ac.uk/biostudies/studies/S-BSST575

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Organelles Captured

nucleusmitochondriachloroplast/plastidvesicles

Metric Families

volumevolume_fractionsurface_areacontacts

Captured Organelle Pairs

chloroplast/plastid:mitochondria chloroplast/plastid:nucleus chloroplast/plastid:vesicles mitochondria:nucleus mitochondria:vesicles nucleus:vesicles

These pairs are derived from the organelles listed for this record. They should not be read as proof that the study explicitly quantified contact sites.

Metadata Completeness

How It's Derived

100%

Completeness score based on standardized reporting of modality, resolution, and curation status.