H446 (lung cancer)
H446 (lung cancer) whole-cell dataset (SBF-SEM)
Jadav et al., 2023, Journal of Structural Biology · SBF-SEM
ResSSBoundary
Key Organelles
nucleusmitochondriavesicles
Corpus
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9 results filtered by organelle: vesicles filtered by family: EM filtered by metric: volume
In this slice of the corpus, 9 dataset records match. FIB-SEM is the most common imaging family and mitochondria is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is mitochondria:vesicles.
Card Tag Legend
ResResolution values are reported.
SSSample size is reported.
BoundaryWhole-cell boundary is confirmed.
Public DataReusable public data is known to exist.
BorderlineRecord has a caveat relative to the main corpus criteria.
Pelagomonas
Pelagomonas whole-cell dataset (FIB-SEM)
Uwizeye et al., 2021, Nature Communications · FIB-SEM
ResSSBoundaryData: Partial
Key Organelles
nucleusmitochondriachloroplast/plastid
Curation note: Some public data available.
Salpingoeca rosetta
Salpingoeca rosetta whole-cell dataset (ssTEM)
Laundon et al., 2019, PLOS Biology · ssTEM
SSBoundaryData: Partial
Key Organelles
nucleusermitochondria
Curation note: Some public data available. 3 colonial, 3 single
Plasmodium falciparum
Plasmodium falciparum whole-cell dataset (SBF-SEM)
Sakaguchi et al., 2016, Journal of Structural Biology · SBF-SEM
ResSSBoundaryData: Partial
Key Organelles
nucleusmitochondriavacuole/lysosome
Curation note: Some public data available. 22 iRBCs, as well as 10 non-iRBCs which don't count becase they don't have organelles
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (FIB-SEM)
Wei et al., 2012, Biotechniques · FIB-SEM
ResSSBoundary
Key Organelles
nucleusermitochondria
Curation note: 1 cell per resolution
Trypanosoma cruzi
Trypanosoma cruzi whole-cell dataset (ssTEM)
Ramos et al., 2011, Cytometry A · ssTEM
ResSSBoundary
Key Organelles
nucleusmitochondriavesicles
Saccharomyces cerevisiae
Saccharomyces cerevisiae whole-cell dataset (ssTEM)
Yamaguchi et al., 2011, J Electron Microsc (Tokyo) · ssTEM
ResSSBoundary
Key Organelles
ermitochondriavacuole/lysosome
Curation note: (3 G1, 3 early G1)
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High biological overlap with enough shared structure to justify direct comparison.
Shared Fields
cell_types: Saccharomyces cerevisiaespecies: Saccharomyces cerevisiaeorganelles: er, golgi, lipid droplets, mitochondria, nucleus, vacuole/lysosome, vesiclesorganelle_pairs: er:golgi, er:lipid droplets, er:mitochondria, er:nucleus, er:vacuole/lysosome, er:vesicles, golgi:lipid droplets, golgi:mitochondria, golgi:nucleus, golgi:vacuole/lysosome, golgi:vesicles, lipid droplets:mitochondria, lipid droplets:nucleus, lipid droplets:vacuole/lysosome, lipid droplets:vesicles, mitochondria:nucleus, mitochondria:vacuole/lysosome, mitochondria:vesicles, nucleus:vacuole/lysosome, nucleus:vesicles, vacuole/lysosome:vesiclesmetric_families: dimensions, volume, volume_fractioncomparator_classes: nonemodality_families: EM
Key Differences
modalities: FIB-SEMsample_size_buckets: 1public_data_statuses: noneboundary_confirmation: yes
Comparability Score:84 / 100
How It's Derived