M. musculus, alpha cell whole-cell dataset (SXT)
Deshmukh et al., 2024, Cells · SXT
Curation note: 8 alpha, 7 beta
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In this slice of the corpus, 42 dataset records match. FIB-SEM is the most common imaging family and mitochondria is the organelle that appears most often with dimensions as the most common metric family. The most common captured organelle pair is mitochondria:nucleus.
Deshmukh et al., 2024, Cells · SXT
Curation note: 8 alpha, 7 beta
Deshmukh et al., 2024, Cells · SXT
Hair et al., 2024, PLOS Pathogens · SBF-SEM
Curation note: Some public data available. 41 in vitro, 10 sand fly-derived
Antao et al., 2023, Nature Communications · SBF-SEM
Curation note: Some public data available. 21+ E.i. ("A minimum of 7 parasites were segmented completely per condition" [sporonts, sporoblasts, spores])
Ezzedine et al., 2023, Nature Communications · FIB-SEM
Curation note: Public data available. 1 chemically fixed, 1 cryo-fixed
Feng et al., 2023, Protoplasma · FIB-SEM
Curation note: 3+ per growth stage; 20 imaged, 15 segmented, but 3 per stage chosen for reconstruction
McQuate et al., 2023, eLife · SBF-SEM
Curation note: Some public data available.
McQuate et al., 2023, eLife · SBF-SEM
Curation note: Some public data available.
Mocaer et al., 2023, Journal of Cell Science · FIB-SEM
Curation note: Some public data available.
Tashyreva et al., 2023, mBio · SBF-SEM
Wang et al., 2023, iScience · Fluorescence
Wang et al., 2023, iScience · Fluorescence
Curation note: 10 cells per 4 cell lines per 2 culture conditions
Wang et al., 2023, iScience · Fluorescence
Wang et al., 2023, iScience · Fluorescence
Zechmann et al., 2022, Planta · FIB-SEM
Zechmann et al., 2022, Planta · ssTEM
Zechmann et al., 2022, Planta · FIB-SEM
Zechmann et al., 2022, Planta · ssTEM
Decelle et al., 2021, Environmental Microbiology · FIB-SEM
Curation note: 3 free-living, 4 symbiotic
Loconte et al., 2021, Cell Reports Methods · SXT
Loconte et al., 2021, Cell Reports Methods · SXT
Muller et al., 2021, Journal of Cell Biology · FIB-SEM
Curation note: Some public data available. 3 low-glucose, 4 high-glucose
Pokrovskaya et al., 2021, Platelets · SBF-SEM
Conesa et al., 2020, mSphere · SXT
Curation note: at least 40 parasites in 19 RBCs, counted from Fig 4, couldn’t find SS stated in text;
Hoffman et al., 2020, Science · FIB-SEM
White et al., 2020, Science Advances · SXT
Curation note: 8 x 5 conditions
Laundon et al., 2019, PLOS Biology · ssTEM
Curation note: Some public data available. 3 colonial, 3 single
Laundon et al., 2019, PLOS Biology · ssTEM
Curation note: Some public data available.
Cooper et al., 2017, Parasites & Vectors · FIB-SEM
Curation note: 2 full reconstructions; quants from 25 cells, only kinetoplasts segmented
Hughes et al., 2017, Journal of Cell Science · SBF-SEM
Curation note: (different n's for each quant)
Feng et al., 2016, Journal of Morphology · SBF-SEM
Curation note: Randomly selected spermatozoa
Rodriguez et al., 2015, IUCrJ · X-ray diffraction
Carlson et al., 2013, Microscopy and Microanalysis · SXT
Curation note: A yeast cell
Wei et al., 2012, Biotechniques · FIB-SEM
Curation note: 1 cell per resolution
Wei et al., 2012, Biotechniques · FIB-SEM
Curation note: 1 cell per resolution
Wei et al., 2012, Biotechniques · FIB-SEM
Curation note: 1 cell per resolution
Zheng et al., 2012, Microscopy research and technique · HXT
Yamaguchi et al., 2011, J Electron Microsc (Tokyo) · ssTEM
Curation note: (3 G1, 3 early G1)
Jiang et al., 2010, PNAS · X-ray diffraction
Noske et al., 2008, Journal of Structural Biology · ET (Cryo)
Parkinson et al., 2008, Journal of Structural Biology · SXT
Curation note: 1 early cc, 1 pre-division, 1 mother & 1 daughter (attached)
Henderson et al., 2007, PLoS One · ET (cryo)
Curation note: 10 (6 best cells used for quantitation) (52 imaged total); 23 dark-to-light transition; 29 light-to-dark transition;
Moderate comparability; useful for targeted comparison with technical caveats.