M. musculus, alpha cell whole-cell dataset (SXT)
Deshmukh et al., 2024, Cells · PMID 38786091 · SXT
Curation note: 8 alpha, 7 beta
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In this slice of the corpus, 40 dataset records match. FIB-SEM is the most common imaging family and nucleus is the organelle that appears most often with dimensions as the most common metric family. The most common captured organelle pair is mitochondria:nucleus.
Deshmukh et al., 2024, Cells · PMID 38786091 · SXT
Curation note: 8 alpha, 7 beta
Deshmukh et al., 2024, Cells · PMID 38786091 · SXT
Hair et al., 2024, PLOS Pathogens · PMID 38416776 · SBF-SEM
Curation note: Some public data available. 41 in vitro, 10 sand fly-derived
Antao et al., 2023, Nature Communications · PMID 37996434 · SBF-SEM
Curation note: Some public data available. 21+ E.i. ("A minimum of 7 parasites were segmented completely per condition" [sporonts, sporoblasts, spores])
Antao et al., 2023, Nature Communications · PMID 37996434 · SBF-SEM
Curation note: Some public data available. 4 Vero (inc PV, Fig 5)
Bianco et al., 2023, Small Methods · PMID 37670547 · Optical tomography (phase contrast)
Ezzedine et al., 2023, Nature Communications · PMID 37980360 · FIB-SEM
Curation note: Public data available. 1 chemically fixed, 1 cryo-fixed
Feng et al., 2023, Protoplasma · PMID 36416933 · FIB-SEM
Curation note: 3+ per growth stage; 20 imaged, 15 segmented, but 3 per stage chosen for reconstruction
Mocaer et al., 2023, Journal of Cell Science · PMID 37455654 · FIB-SEM
Curation note: Some public data available.
Tashyreva et al., 2023, mBio · PMID 37737610 · SBF-SEM
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Curation note: 10 cells per 4 cell lines per 2 culture conditions
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Attias et al., 2022, Micron · PMID 34798356 · FIB-SEM
Curation note: Unclear
Zechmann et al., 2022, Planta · PMID 35522384 · FIB-SEM
Zechmann et al., 2022, Planta · PMID 35522384 · ssTEM
Zechmann et al., 2022, Planta · PMID 35522384 · FIB-SEM
Zechmann et al., 2022, Planta · PMID 35522384 · ssTEM
Decelle et al., 2021, Environmental Microbiology · PMID 34499794 · FIB-SEM
Curation note: 3 free-living, 4 symbiotic
Muller et al., 2021, Journal of Cell Biology · PMID 33326005 · FIB-SEM
Curation note: Some public data available. 3 low-glucose, 4 high-glucose
Hoffman et al., 2020, Science · PMID 31949053 · FIB-SEM
Pollreisz et al., 2020, Invest Ophthalmol Vis Sci. · PMID 32648890 · SBF-SEM
White et al., 2020, Science Advances · PMID 33298443 · SXT
Curation note: 8 x 5 conditions
Laundon et al., 2019, PLOS Biology · PMID 30978201 · ssTEM
Curation note: Some public data available. 3 colonial, 3 single
Laundon et al., 2019, PLOS Biology · PMID 30978201 · ssTEM
Curation note: Some public data available.
Yao et al., 2018, IUCrJ · PMID 29765603 · STXM
Fogelqvist et al., 2017, Scientific Reports · PMID 29044158 · SXT
Hughes et al., 2017, Journal of Cell Science · PMID 28049718 · SBF-SEM
Curation note: (different n's for each quant)
Oi et al., 2017, Annals of Botany · PMID 28444369 · FIB-SEM
Curation note: 1 visible 3D reconstruction, 2 addtl in supp movies (chloroplast counts)
Feng et al., 2016, Journal of Morphology · PMID 26877112 · SBF-SEM
Curation note: Randomly selected spermatozoa
Rodriguez et al., 2015, IUCrJ · PMID 26306199 · X-ray diffraction
Carlson et al., 2013, Microscopy and Microanalysis · PMID 23332214 · SXT
Curation note: A yeast cell
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
Curation note: 1 cell per resolution
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
Curation note: 1 cell per resolution
Wei et al., 2012, Biotechniques · PMID 22780318 · FIB-SEM
Curation note: 1 cell per resolution
Jiang et al., 2010, PNAS · PMID 20534442 · X-ray diffraction
Noske et al., 2008, Journal of Structural Biology · PMID 18069000 · ET (Cryo)
Parkinson et al., 2008, Journal of Structural Biology · PMID 18387313 · SXT
Curation note: 1 early cc, 1 pre-division, 1 mother & 1 daughter (attached)
Henderson et al., 2007, PLoS One · PMID 17710148 · ET (cryo)
Curation note: 10 (6 best cells used for quantitation) (52 imaged total); 23 dark-to-light transition; 29 light-to-dark transition;
Moderate comparability; useful for targeted comparison with technical caveats.
This selection includes multiple dataset records from the same paper: Deshmukh 2024. Treat the result as an within-study alignment check, not independent cross-study validation.