Corpus
Search the Whole-Cell Imaging Corpus.
Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.
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Most Common Traits in This Slice
A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.
2 results filtered by organelle: peroxisome filtered by metric: distance
In this slice of the corpus, 2 dataset records match. FESEM is the most common imaging family and mitochondria is the organelle that appears most often with contacts as the most common metric family. The most common captured organelle pair is mitochondria:peroxisome.
| Compare | Dataset | Cell Type | Modality | Voxel Size (XY/Z nm) | Sample Size | Data Publicly Available |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana, mesophyll whole-cell dataset (FESEM) Midorikawa et al., 2022, PNAS Nexus · PMID 36712360 | Arabidopsis thaliana, mesophyll Arabidopsis thaliana | FESEM | 10 x 100 nm voxel (XY/Z) | 6 | Not Indexed | |
| COS-7 (Cercopithecus aethiops) whole-cell dataset (Fluorescence (LLS)) Valm et al., 2017, Nature · PMID 28538724 | COS-7 (Cercopithecus aethiops) NHP | Fluorescence (LLS) | 334.5 x 798 nm voxel (XY/Z) | 10 | Not Indexed |
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Example Compare Summary
Low direct comparability; treat these datasets as analogs rather than close matches.
Shared Fields
cell_types: nonespecies: noneorganelles: mitochondria, peroxisome, vacuole/lysosomeorganelle_pairs: mitochondria:peroxisome, mitochondria:vacuole/lysosome, peroxisome:vacuole/lysosomemetric_families: contacts, count, distance, volume, volume_fractioncomparator_classes: nonemodality_families: none
Key Differences
modalities: FESEM, Fluorescence (LLS)sample_size_buckets: 2-10public_data_statuses: noneboundary_confirmation: yes
Comparability Score:40 / 100
How It's Derived