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Arabidopsis thaliana, mesophyll

Arabidopsis thaliana

Arabidopsis thaliana, mesophyll whole-cell dataset (FESEM)

Midorikawa et al., 2022, PNAS Nexus

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Curation Notes

3L, 3D

Technical Specs

Modality

FESEM

Voxel Size

10 x 100 nm voxel (XY/Z)

Sample Size

6

Whole-Cell Boundary

yes

Comparators / Conditions

Comparator Class

other

Comparator Detail

Light/Dark

Provenance

This record was ingested from the Cell Anatomy Scoping Review corpus.

PMID 36712360 View Publication

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Organelles Captured

nucleusmitochondriavacuole/lysosomechloroplast/plastidperoxisome

Metric Families

volumevolume_fractioncountsurface_areadistancecontactsshapeother

Captured Organelle Pairs

chloroplast/plastid:mitochondria chloroplast/plastid:nucleus chloroplast/plastid:peroxisome chloroplast/plastid:vacuole/lysosome mitochondria:nucleus mitochondria:peroxisome mitochondria:vacuole/lysosome nucleus:peroxisome nucleus:vacuole/lysosome peroxisome:vacuole/lysosome

These pairs are derived from the organelles listed for this record. They should not be read as proof that the study explicitly quantified contact sites.

Metadata Completeness

How It's Derived

95%

Completeness score based on standardized reporting of modality, resolution, and curation status.