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Phaeocystis cordata

Phaeocystis cordata

Phaeocystis cordata whole-cell dataset (FIB-SEM)

Uwizeye et al., 2021, PNAS

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Curation Notes

Some public data available. 20 free-living + 7 symbiotic (w/ Â and w/o host Acantharia (radiolarian protozoa, marine microplankton))

Technical Specs

Modality

FIB-SEM

Voxel Size

7.5 x 7.5 nm voxel (XY/Z) isotropic

Sample Size

27

Whole-Cell Boundary

yes

Comparators / Conditions

Comparator Class

metabolic condition

Comparator Detail

Metabolic State; Other: free-living vs symbiotic

Provenance

This record was ingested from the Cell Anatomy Scoping Review corpus.

PMID 34215695 View Publication Data Publicly Available: Partial

Public Data Links

https://www.ebi.ac.uk/empiar/EMPIAR-10672/

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Organelles Captured

nucleusmitochondriavacuole/lysosomechloroplast/plastid

Metric Families

volumevolume_fractionsurface_areadistancecontactsshape

Captured Organelle Pairs

chloroplast/plastid:mitochondria chloroplast/plastid:nucleus chloroplast/plastid:vacuole/lysosome mitochondria:nucleus mitochondria:vacuole/lysosome nucleus:vacuole/lysosome

These pairs are derived from the organelles listed for this record. They should not be read as proof that the study explicitly quantified contact sites.

Metadata Completeness

How It's Derived

100%

Completeness score based on standardized reporting of modality, resolution, and curation status.