Pelagomonas
Pelagomonas whole-cell dataset (FIB-SEM)
Uwizeye et al., 2021, Nature Communications · FIB-SEM
ResSSBoundaryData: Partial
Key Organelles
nucleusmitochondriachloroplast/plastid
Curation note: Some public data available.
Corpus
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3 results filtered by organelle: vesicles filtered by public data status: partial
In this slice of the corpus, 3 dataset records match. FIB-SEM is the most common imaging family and mitochondria is the organelle that appears most often with volume as the most common metric family. The most common captured organelle pair is mitochondria:nucleus.
Card Tag Legend
ResResolution values are reported.
SSSample size is reported.
BoundaryWhole-cell boundary is confirmed.
Public DataReusable public data is known to exist.
BorderlineRecord has a caveat relative to the main corpus criteria.
Salpingoeca rosetta
Salpingoeca rosetta whole-cell dataset (ssTEM)
Laundon et al., 2019, PLOS Biology · ssTEM
SSBoundaryData: Partial
Key Organelles
nucleusermitochondria
Curation note: Some public data available. 3 colonial, 3 single
Plasmodium falciparum
Plasmodium falciparum whole-cell dataset (SBF-SEM)
Sakaguchi et al., 2016, Journal of Structural Biology · SBF-SEM
ResSSBoundaryData: Partial
Key Organelles
nucleusmitochondriavacuole/lysosome
Curation note: Some public data available. 22 iRBCs, as well as 10 non-iRBCs which don't count becase they don't have organelles
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Low direct comparability; treat these datasets as analogs rather than close matches.
Shared Fields
cell_types: nonespecies: noneorganelles: mitochondria, nucleus, vesiclesorganelle_pairs: mitochondria:nucleus, mitochondria:vesicles, nucleus:vesiclesmetric_families: contacts, volume, volume_fractioncomparator_classes: nonemodality_families: EM
Key Differences
modalities: FIB-SEM, ssTEMsample_size_buckets: 2-10public_data_statuses: partialboundary_confirmation: yes
Comparability Score:44 / 100
How It's Derived