Corpus

Search the Whole-Cell Imaging Corpus.

Filter the atlas, inspect records in card view, switch to table when you want a denser scan, and build a compare set from either view.

Use This Page

scanfilteropen recordscompare

Table view is best for scanning fast. Cards give more context. Compare selection now works in both views, and the drawer follows you until you clear it or open Compare.

Most Common Traits in This Slice

A quick snapshot of the active result set. Click a trait to narrow the corpus to that subset.

10 results filtered by organelle: chloroplast/plastid filtered by metric: contacts

CardsTable
Export:CSVJSONBibTeXClear all

In this slice of the corpus, 10 dataset records match. FIB-SEM is the most common imaging family and chloroplast/plastid is the organelle that appears most often with contacts as the most common metric family. The most common captured organelle pair is chloroplast/plastid:mitochondria.

CompareDatasetCell TypeModalityVoxel Size (XY/Z nm)Sample SizeData Publicly Available
Sanguina nivaloides whole-cell dataset (FIB-SEM)
Sanguina nivaloides
Sanguina nivaloides
FIB-SEM9 x 9 nm voxel (XY/Z) isotropic2Complete
Arabidopsis thaliana, mesophyll whole-cell dataset (FESEM)
Arabidopsis thaliana, mesophyll
Arabidopsis thaliana
FESEM10 x 100 nm voxel (XY/Z)6Not Indexed
Micromonas whole-cell dataset (FIB-SEM)
Micromonas
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Emiliana whole-cell dataset (FIB-SEM)
Emiliana
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Symbiodinium whole-cell dataset (FIB-SEM)
Symbiodinium
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Galdieria whole-cell dataset (FIB-SEM)
Galdieria
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Phaeodactylum whole-cell dataset (FIB-SEM)
Phaeodactylum
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Nannochloropsis whole-cell dataset (FIB-SEM)
Nannochloropsis
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Pelagomonas whole-cell dataset (FIB-SEM)
Pelagomonas
Protist (plankton)
FIB-SEM6 x 6 nm voxel (XY/Z) isotropic3Partial
Phaeocystis cordata whole-cell dataset (FIB-SEM)
Phaeocystis cordata
Phaeocystis cordata
FIB-SEM7.5 x 7.5 nm voxel (XY/Z) isotropic27Partial
Compare Mode Preview

Example Compare Summary

Moderate comparability; useful for targeted comparison with technical caveats.

Shared Fields

cell_types: nonespecies: Protist (plankton)organelles: chloroplast/plastid, mitochondria, nucleusorganelle_pairs: chloroplast/plastid:mitochondria, chloroplast/plastid:nucleus, mitochondria:nucleusmetric_families: contacts, surface_area, volume, volume_fractioncomparator_classes: cell typemodality_families: EM

Key Differences

modalities: FIB-SEMsample_size_buckets: 2-10public_data_statuses: partialboundary_confirmation: yes
Comparability Score:67 / 100
How It's Derived