Saccharomyces cerevisiae whole-cell dataset (Fluorescence)
Kichuk et al., 2024, Cell Reports Methods · PMID 38232737 · Fluorescence
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A quick reading of the active result set. Click a trait to narrow the corpus to that subset; this is a frequency snapshot, not a quality ranking.
In this slice of the corpus, 19 dataset records match. Fluorescence is the most common imaging family and mitochondria is the organelle that appears most often with distance as the most common metric family. The most common captured organelle pair is mitochondria:nucleus.
Kichuk et al., 2024, Cell Reports Methods · PMID 38232737 · Fluorescence
Feng et al., 2023, Protoplasma · PMID 36416933 · FIB-SEM
Curation note: 3+ per growth stage; 20 imaged, 15 segmented, but 3 per stage chosen for reconstruction
Tashyreva et al., 2023, mBio · PMID 37737610 · SBF-SEM
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Curation note: 10 cells per 4 cell lines per 2 culture conditions
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Wang et al., 2023, iScience · PMID 37519903 · Fluorescence
Li et al., 2022, PLoS One. · PMID 35324950 · SXT
Curation note: 40 tomograms from SXT extended to 132. unsure if those original 40 are included in the 132. 3 for analysis
Loconte et al., 2022, Structure · PMID 35148829 · SXT
Midorikawa et al., 2022, PNAS Nexus · PMID 36712360 · FESEM
Curation note: 3L, 3D
Uwizeye et al., 2021, PNAS · PMID 34215695 · FIB-SEM
Curation note: Some public data available. 20 free-living + 7 symbiotic (w/ Â and w/o host Acantharia (radiolarian protozoa, marine microplankton))
White et al., 2020, Science Advances · PMID 33298443 · SXT
Curation note: 8 x 5 conditions
Laundon et al., 2019, PLOS Biology · PMID 30978201 · ssTEM
Curation note: Some public data available. 3 colonial, 3 single
Laundon et al., 2019, PLOS Biology · PMID 30978201 · ssTEM
Curation note: Some public data available.
Hughes et al., 2017, Journal of Cell Science · PMID 28049718 · SBF-SEM
Curation note: (different n's for each quant)
Valm et al., 2017, Nature · PMID 28538724 · Fluorescence (LLS)
Yamaguchi et al., 2011, J Electron Microsc (Tokyo) · PMID 21908548 · ssTEM
Curation note: (3 G1, 3 early G1)
Noske et al., 2008, Journal of Structural Biology · PMID 18069000 · ET (Cryo)
Perktold et al., 2007, FEMS Yeast Res · PMID 17419771 · ssTEM
Curation note: at least one chemically fixed and one cryofixed
Moderate comparability; useful for targeted comparison with technical caveats.